Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.08■□□□□ 0.16
Nub1P54729 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nub1P54729 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nub1P54729 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Nub1P54729 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Nub1P54729 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nub1P54729 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Nub1P54729 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.07■□□□□ 0.16
Nub1P54729 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Nub1P54729 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.07■□□□□ 0.16
Nub1P54729 Gm12260-201ENSMUST00000122447 411 ntBASIC16.07■□□□□ 0.16
Nub1P54729 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.07■□□□□ 0.16
Nub1P54729 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.07■□□□□ 0.16
Nub1P54729 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Nub1P54729 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nub1P54729 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Nub1P54729 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Nub1P54729 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.06■□□□□ 0.16
Nub1P54729 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Gm12008-201ENSMUST00000117791 755 ntBASIC16.06■□□□□ 0.16
Nub1P54729 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Nub1P54729 Gm17968-201ENSMUST00000194902 784 ntBASIC16.06■□□□□ 0.16
Nub1P54729 Gm43514-201ENSMUST00000198852 424 ntBASIC16.06■□□□□ 0.16
Nub1P54729 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nub1P54729 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Nub1P54729 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.06■□□□□ 0.16
Nub1P54729 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.05■□□□□ 0.16
Nub1P54729 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.05■□□□□ 0.16
Nub1P54729 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nub1P54729 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nub1P54729 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.05■□□□□ 0.16
Nub1P54729 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nub1P54729 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.05■□□□□ 0.16
Nub1P54729 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms