Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Msh6P54276 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh6P54276 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Msh6P54276 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.84■□□□□ 0.61
Msh6P54276 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Msh6P54276 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Msh6P54276 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Msh6P54276 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh6P54276 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Msh6P54276 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh6P54276 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh6P54276 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh6P54276 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Msh6P54276 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh6P54276 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.83■□□□□ 0.61
Msh6P54276 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Msh6P54276 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.83■□□□□ 0.61
Msh6P54276 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Msh6P54276 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.83■□□□□ 0.61
Msh6P54276 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Msh6P54276 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh6P54276 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Msh6P54276 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh6P54276 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh6P54276 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh6P54276 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh6P54276 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh6P54276 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh6P54276 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh6P54276 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.83■□□□□ 0.6
Msh6P54276 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh6P54276 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Msh6P54276 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh6P54276 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Msh6P54276 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.83■□□□□ 0.6
Msh6P54276 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Gm9719-201ENSMUST00000162765 543 ntBASIC18.82■□□□□ 0.6
Msh6P54276 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh6P54276 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh6P54276 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Msh6P54276 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh6P54276 Gm5566-201ENSMUST00000116118 459 ntBASIC18.81■□□□□ 0.6
Msh6P54276 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.81■□□□□ 0.6
Msh6P54276 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh6P54276 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh6P54276 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Msh6P54276 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh6P54276 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh6P54276 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.81■□□□□ 0.6
Msh6P54276 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Msh6P54276 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh6P54276 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh6P54276 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Msh6P54276 Gm24543-201ENSMUST00000103867 82 ntBASIC18.81■□□□□ 0.6
Msh6P54276 Gm29667-201ENSMUST00000190817 490 ntBASIC18.81■□□□□ 0.6
Msh6P54276 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.81■□□□□ 0.6
Msh6P54276 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Msh6P54276 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.81■□□□□ 0.6
Msh6P54276 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh6P54276 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh6P54276 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh6P54276 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh6P54276 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Msh6P54276 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.8■□□□□ 0.6
Msh6P54276 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Msh6P54276 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh6P54276 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh6P54276 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh6P54276 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms