Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.78□□□□□ -0.04
Pdx1P52946 Thap2-203ENSMUST00000218989 527 ntBASIC14.78□□□□□ -0.04
Pdx1P52946 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.78□□□□□ -0.04
Pdx1P52946 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pdx1P52946 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdx1P52946 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdx1P52946 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pdx1P52946 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdx1P52946 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdx1P52946 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdx1P52946 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdx1P52946 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdx1P52946 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdx1P52946 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdx1P52946 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.77□□□□□ -0.05
Pdx1P52946 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pdx1P52946 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.77□□□□□ -0.05
Pdx1P52946 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.77□□□□□ -0.05
Pdx1P52946 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.77□□□□□ -0.05
Pdx1P52946 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdx1P52946 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.76□□□□□ -0.05
Pdx1P52946 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.76□□□□□ -0.05
Pdx1P52946 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Pdx1P52946 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.76□□□□□ -0.05
Pdx1P52946 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.76□□□□□ -0.05
Pdx1P52946 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.76□□□□□ -0.05
Pdx1P52946 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Gm5264-201ENSMUST00000190584 848 ntBASIC14.76□□□□□ -0.05
Pdx1P52946 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.76□□□□□ -0.05
Pdx1P52946 Gm44492-201ENSMUST00000197012 141 ntBASIC14.76□□□□□ -0.05
Pdx1P52946 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.76□□□□□ -0.05
Pdx1P52946 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.76□□□□□ -0.05
Pdx1P52946 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pdx1P52946 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pdx1P52946 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdx1P52946 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdx1P52946 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdx1P52946 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Pdx1P52946 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdx1P52946 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Pdx1P52946 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pdx1P52946 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdx1P52946 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdx1P52946 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdx1P52946 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pdx1P52946 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.75□□□□□ -0.05
Pdx1P52946 Gm9385-201ENSMUST00000117563 472 ntBASIC14.75□□□□□ -0.05
Pdx1P52946 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms