Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Gm11478-201ENSMUST00000117851 599 ntBASIC12.94□□□□□ -0.34
TgfaP48030 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.94□□□□□ -0.34
TgfaP48030 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.94□□□□□ -0.34
TgfaP48030 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.94□□□□□ -0.34
TgfaP48030 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.94□□□□□ -0.34
TgfaP48030 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.94□□□□□ -0.34
TgfaP48030 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.94□□□□□ -0.34
TgfaP48030 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TgfaP48030 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TgfaP48030 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.94□□□□□ -0.34
TgfaP48030 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TgfaP48030 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TgfaP48030 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TgfaP48030 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TgfaP48030 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TgfaP48030 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
TgfaP48030 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TgfaP48030 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.93□□□□□ -0.34
TgfaP48030 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Gm8515-201ENSMUST00000194852 576 ntBASIC12.93□□□□□ -0.34
TgfaP48030 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Shd-206ENSMUST00000225145 998 ntBASIC12.93□□□□□ -0.34
TgfaP48030 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.93□□□□□ -0.34
TgfaP48030 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TgfaP48030 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TgfaP48030 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
TgfaP48030 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.92□□□□□ -0.34
TgfaP48030 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TgfaP48030 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Gm23984-201ENSMUST00000157139 203 ntBASIC12.92□□□□□ -0.34
TgfaP48030 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.92□□□□□ -0.34
TgfaP48030 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TgfaP48030 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
TgfaP48030 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TgfaP48030 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TgfaP48030 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.92□□□□□ -0.34
TgfaP48030 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TgfaP48030 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.91□□□□□ -0.34
TgfaP48030 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TgfaP48030 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TgfaP48030 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TgfaP48030 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TgfaP48030 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TgfaP48030 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TgfaP48030 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TgfaP48030 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TgfaP48030 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.91□□□□□ -0.34
TgfaP48030 Gm29667-201ENSMUST00000190817 490 ntBASIC12.91□□□□□ -0.34
TgfaP48030 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TgfaP48030 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TgfaP48030 Gm45384-201ENSMUST00000210451 277 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms