Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HttP42859 Gm7783-201ENSMUST00000204795 781 ntBASIC15.68■□□□□ 0.1
HttP42859 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.68■□□□□ 0.1
HttP42859 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HttP42859 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HttP42859 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HttP42859 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HttP42859 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HttP42859 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HttP42859 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HttP42859 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HttP42859 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HttP42859 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HttP42859 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HttP42859 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.67■□□□□ 0.1
HttP42859 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HttP42859 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.67■□□□□ 0.1
HttP42859 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.67■□□□□ 0.1
HttP42859 Gm8598-201ENSMUST00000221184 836 ntBASIC15.67■□□□□ 0.1
HttP42859 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.67■□□□□ 0.1
HttP42859 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HttP42859 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HttP42859 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.66■□□□□ 0.1
HttP42859 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.66■□□□□ 0.1
HttP42859 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.66■□□□□ 0.1
HttP42859 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HttP42859 Gm15429-201ENSMUST00000151268 798 ntBASIC15.66■□□□□ 0.1
HttP42859 Gm22902-201ENSMUST00000158488 302 ntBASIC15.66■□□□□ 0.1
HttP42859 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HttP42859 Gm45098-201ENSMUST00000207179 657 ntBASIC15.66■□□□□ 0.1
HttP42859 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.66■□□□□ 0.1
HttP42859 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HttP42859 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.66■□□□□ 0.1
HttP42859 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.66■□□□□ 0.1
HttP42859 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
HttP42859 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.66■□□□□ 0.1
HttP42859 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HttP42859 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HttP42859 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HttP42859 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HttP42859 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.65■□□□□ 0.1
HttP42859 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.65■□□□□ 0.1
HttP42859 Gm24644-201ENSMUST00000157114 139 ntBASIC15.65■□□□□ 0.1
HttP42859 Gm40466-201ENSMUST00000212174 422 ntBASIC15.65■□□□□ 0.1
HttP42859 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HttP42859 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HttP42859 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HttP42859 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
HttP42859 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HttP42859 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HttP42859 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.65■□□□□ 0.1
HttP42859 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HttP42859 Gm43822-201ENSMUST00000200285 476 ntBASIC15.65■□□□□ 0.1
HttP42859 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 Gm27486-201ENSMUST00000184923 80 ntBASIC15.64■□□□□ 0.09
HttP42859 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
HttP42859 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HttP42859 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
HttP42859 Gm12928-201ENSMUST00000117115 573 ntBASIC15.64■□□□□ 0.09
HttP42859 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.64■□□□□ 0.09
HttP42859 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 Prob1-201ENSMUST00000097619 3021 ntBASIC15.64■□□□□ 0.09
HttP42859 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HttP42859 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HttP42859 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
HttP42859 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HttP42859 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.63■□□□□ 0.09
HttP42859 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms