Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx1-2P42580 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx1-2P42580 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx1-2P42580 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx1-2P42580 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Nkx1-2P42580 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nkx1-2P42580 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx1-2P42580 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nkx1-2P42580 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx1-2P42580 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx1-2P42580 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx1-2P42580 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.4■□□□□ 0.54
Nkx1-2P42580 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Gm5682-201ENSMUST00000173402 505 ntBASIC18.4■□□□□ 0.54
Nkx1-2P42580 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nkx1-2P42580 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Nkx1-2P42580 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nkx1-2P42580 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nkx1-2P42580 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Gm25990-201ENSMUST00000102440 86 ntBASIC18.39■□□□□ 0.53
Nkx1-2P42580 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.39■□□□□ 0.53
Nkx1-2P42580 Gm10499-201ENSMUST00000174094 934 ntBASIC18.39■□□□□ 0.53
Nkx1-2P42580 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-2P42580 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-2P42580 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.38■□□□□ 0.53
Nkx1-2P42580 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.38■□□□□ 0.53
Nkx1-2P42580 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
Nkx1-2P42580 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.37■□□□□ 0.53
Nkx1-2P42580 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.37■□□□□ 0.53
Nkx1-2P42580 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.37■□□□□ 0.53
Nkx1-2P42580 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms