Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox6P40645 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.06□□□□□ -0.16
Sox6P40645 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Sox6P40645 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.06□□□□□ -0.16
Sox6P40645 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox6P40645 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.06□□□□□ -0.16
Sox6P40645 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sox6P40645 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.06□□□□□ -0.16
Sox6P40645 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox6P40645 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sox6P40645 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sox6P40645 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.05□□□□□ -0.16
Sox6P40645 Gm8097-201ENSMUST00000117903 829 ntBASIC14.05□□□□□ -0.16
Sox6P40645 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.05□□□□□ -0.16
Sox6P40645 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sox6P40645 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox6P40645 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sox6P40645 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Sox6P40645 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Sox6P40645 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox6P40645 Gm18622-201ENSMUST00000219361 595 ntBASIC14.04□□□□□ -0.16
Sox6P40645 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sox6P40645 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sox6P40645 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sox6P40645 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Sox6P40645 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sox6P40645 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox6P40645 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sox6P40645 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sox6P40645 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Sox6P40645 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Sox6P40645 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Sox6P40645 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sox6P40645 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.03□□□□□ -0.16
Sox6P40645 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sox6P40645 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sox6P40645 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox6P40645 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox6P40645 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.03□□□□□ -0.16
Sox6P40645 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox6P40645 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.03□□□□□ -0.16
Sox6P40645 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms