Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm8344-201ENSMUST00000119813 856 ntBASIC15.32■□□□□ 0.04
Mmp13P33435 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.32■□□□□ 0.04
Mmp13P33435 Gm11780-201ENSMUST00000136880 516 ntBASIC15.32■□□□□ 0.04
Mmp13P33435 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.32■□□□□ 0.04
Mmp13P33435 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp13P33435 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.32■□□□□ 0.04
Mmp13P33435 Gm6089-201ENSMUST00000197666 938 ntBASIC15.32■□□□□ 0.04
Mmp13P33435 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.32■□□□□ 0.04
Mmp13P33435 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp13P33435 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp13P33435 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Mmp13P33435 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Mmp13P33435 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp13P33435 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.32■□□□□ 0.04
Mmp13P33435 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp13P33435 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Mmp13P33435 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp13P33435 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Mmp13P33435 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp13P33435 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp13P33435 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Mmp13P33435 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp13P33435 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp13P33435 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp13P33435 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Mmp13P33435 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Mmp13P33435 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.31■□□□□ 0.04
Mmp13P33435 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.31■□□□□ 0.04
Mmp13P33435 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.31■□□□□ 0.04
Mmp13P33435 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Mmp13P33435 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Mmp13P33435 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Mmp13P33435 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp13P33435 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Mmp13P33435 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.3■□□□□ 0.04
Mmp13P33435 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.3■□□□□ 0.04
Mmp13P33435 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Mmp13P33435 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Celf4-206ENSMUST00000224553 1729 ntBASIC15.3■□□□□ 0.04
Mmp13P33435 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.3■□□□□ 0.04
Mmp13P33435 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Mmp13P33435 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Mmp13P33435 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp13P33435 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
Mmp13P33435 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp13P33435 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Mmp13P33435 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Mmp13P33435 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp13P33435 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp13P33435 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp13P33435 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp13P33435 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp13P33435 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.29■□□□□ 0.04
Mmp13P33435 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp13P33435 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp13P33435 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.29■□□□□ 0.04
Mmp13P33435 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.29■□□□□ 0.04
Mmp13P33435 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.29■□□□□ 0.04
Mmp13P33435 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Mmp13P33435 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.29■□□□□ 0.04
Mmp13P33435 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.29■□□□□ 0.04
Mmp13P33435 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp13P33435 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp13P33435 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp13P33435 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp13P33435 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Mmp13P33435 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms