Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Slc6a1P31648 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Slc6a1P31648 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.9□□□□□ -0.34
Slc6a1P31648 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a1P31648 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.9□□□□□ -0.35
Slc6a1P31648 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Slc6a1P31648 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Slc6a1P31648 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Slc6a1P31648 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.89□□□□□ -0.35
Slc6a1P31648 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.89□□□□□ -0.35
Slc6a1P31648 Gm9103-201ENSMUST00000119371 405 ntBASIC12.89□□□□□ -0.35
Slc6a1P31648 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.89□□□□□ -0.35
Slc6a1P31648 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Slc6a1P31648 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Slc6a1P31648 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a1P31648 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.88□□□□□ -0.35
Slc6a1P31648 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Slc6a1P31648 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Slc6a1P31648 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.88□□□□□ -0.35
Slc6a1P31648 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.88□□□□□ -0.35
Slc6a1P31648 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.88□□□□□ -0.35
Slc6a1P31648 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Slc6a1P31648 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.88□□□□□ -0.35
Slc6a1P31648 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
Slc6a1P31648 Gm10819-201ENSMUST00000099988 561 ntBASIC12.88□□□□□ -0.35
Slc6a1P31648 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Slc6a1P31648 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.88□□□□□ -0.35
Slc6a1P31648 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Slc6a1P31648 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.88□□□□□ -0.35
Slc6a1P31648 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a1P31648 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.88□□□□□ -0.35
Slc6a1P31648 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Slc6a1P31648 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.87□□□□□ -0.35
Slc6a1P31648 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.87□□□□□ -0.35
Slc6a1P31648 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.87□□□□□ -0.35
Slc6a1P31648 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.87□□□□□ -0.35
Slc6a1P31648 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.87□□□□□ -0.35
Slc6a1P31648 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Slc6a1P31648 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.87□□□□□ -0.35
Slc6a1P31648 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Slc6a1P31648 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.87□□□□□ -0.35
Slc6a1P31648 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms