Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Tpm3P21107 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tpm3P21107 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Tpm3P21107 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tpm3P21107 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tpm3P21107 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tpm3P21107 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tpm3P21107 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm3P21107 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Tpm3P21107 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm3P21107 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tpm3P21107 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Tpm3P21107 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm3P21107 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Tpm3P21107 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm3P21107 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.76■□□□□ 0.27
Tpm3P21107 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm3P21107 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm3P21107 Gm11355-201ENSMUST00000121120 306 ntBASIC16.76■□□□□ 0.27
Tpm3P21107 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm3P21107 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm3P21107 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tpm3P21107 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Tpm3P21107 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Tpm3P21107 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.75■□□□□ 0.27
Tpm3P21107 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tpm3P21107 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.75■□□□□ 0.27
Tpm3P21107 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.75■□□□□ 0.27
Tpm3P21107 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tpm3P21107 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.75■□□□□ 0.27
Tpm3P21107 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm3P21107 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Tpm3P21107 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.74■□□□□ 0.27
Tpm3P21107 Gm21559-201ENSMUST00000220638 855 ntBASIC16.74■□□□□ 0.27
Tpm3P21107 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.74■□□□□ 0.27
Tpm3P21107 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Gm8587-201ENSMUST00000076538 843 ntBASIC16.74■□□□□ 0.27
Tpm3P21107 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.74■□□□□ 0.27
Tpm3P21107 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Tpm3P21107 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.74■□□□□ 0.27
Tpm3P21107 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.74■□□□□ 0.27
Tpm3P21107 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm3P21107 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Tpm3P21107 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tpm3P21107 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.73■□□□□ 0.27
Tpm3P21107 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tpm3P21107 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Tpm3P21107 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.73■□□□□ 0.27
Tpm3P21107 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.73■□□□□ 0.27
Tpm3P21107 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.73■□□□□ 0.27
Tpm3P21107 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.73■□□□□ 0.27
Tpm3P21107 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tpm3P21107 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm3P21107 Celf4-206ENSMUST00000224553 1729 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms