Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Gm43438-201ENSMUST00000198133 379 ntBASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf9P20334 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Carlr-201ENSMUST00000181515 2574 ntBASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Gm17968-201ENSMUST00000194902 784 ntBASIC12.24□□□□□ -0.45
Tnfrsf9P20334 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Tnfrsf9P20334 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.23□□□□□ -0.45
Tnfrsf9P20334 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms