Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntn1P12960 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.34□□□□□ -0.11
Cntn1P12960 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cntn1P12960 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.34□□□□□ -0.11
Cntn1P12960 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntn1P12960 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cntn1P12960 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntn1P12960 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntn1P12960 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cntn1P12960 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cntn1P12960 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cntn1P12960 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cntn1P12960 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.33□□□□□ -0.12
Cntn1P12960 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.33□□□□□ -0.12
Cntn1P12960 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.33□□□□□ -0.12
Cntn1P12960 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.33□□□□□ -0.12
Cntn1P12960 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.33□□□□□ -0.12
Cntn1P12960 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.33□□□□□ -0.12
Cntn1P12960 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cntn1P12960 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cntn1P12960 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cntn1P12960 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cntn1P12960 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cntn1P12960 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cntn1P12960 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntn1P12960 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Cntn1P12960 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.32□□□□□ -0.12
Cntn1P12960 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cntn1P12960 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Cntn1P12960 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.32□□□□□ -0.12
Cntn1P12960 Gm14701-201ENSMUST00000117156 348 ntBASIC14.32□□□□□ -0.12
Cntn1P12960 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cntn1P12960 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.32□□□□□ -0.12
Cntn1P12960 Gm44335-201ENSMUST00000196879 141 ntBASIC14.32□□□□□ -0.12
Cntn1P12960 Gm44297-201ENSMUST00000198304 141 ntBASIC14.32□□□□□ -0.12
Cntn1P12960 Gm44346-201ENSMUST00000198851 141 ntBASIC14.32□□□□□ -0.12
Cntn1P12960 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.32□□□□□ -0.12
Cntn1P12960 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.32□□□□□ -0.12
Cntn1P12960 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.32□□□□□ -0.12
Cntn1P12960 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.32□□□□□ -0.12
Cntn1P12960 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Cntn1P12960 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntn1P12960 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cntn1P12960 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Cntn1P12960 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.31□□□□□ -0.12
Cntn1P12960 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
Cntn1P12960 Rprl2-201ENSMUST00000157150 290 ntBASIC14.31□□□□□ -0.12
Cntn1P12960 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.31□□□□□ -0.12
Cntn1P12960 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Celf4-206ENSMUST00000224553 1729 ntBASIC14.31□□□□□ -0.12
Cntn1P12960 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms