Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Vti1aO89116 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Vti1aO89116 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Vti1aO89116 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Gm25948-201ENSMUST00000175334 112 ntBASIC16.11■□□□□ 0.17
Vti1aO89116 Gm43125-201ENSMUST00000201724 730 ntBASIC16.11■□□□□ 0.17
Vti1aO89116 Gm20553-201ENSMUST00000204205 844 ntBASIC16.11■□□□□ 0.17
Vti1aO89116 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.11■□□□□ 0.17
Vti1aO89116 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.11■□□□□ 0.17
Vti1aO89116 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.11■□□□□ 0.17
Vti1aO89116 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
Vti1aO89116 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.11■□□□□ 0.17
Vti1aO89116 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.1■□□□□ 0.17
Vti1aO89116 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Vti1aO89116 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Vti1aO89116 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Vti1aO89116 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Vti1aO89116 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.1■□□□□ 0.17
Vti1aO89116 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Vti1aO89116 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.1■□□□□ 0.17
Vti1aO89116 Gm20949-201ENSMUST00000206478 952 ntBASIC16.1■□□□□ 0.17
Vti1aO89116 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.1■□□□□ 0.17
Vti1aO89116 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.1■□□□□ 0.17
Vti1aO89116 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.1■□□□□ 0.17
Vti1aO89116 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vti1aO89116 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Vti1aO89116 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 BC037039-201ENSMUST00000192003 2205 ntBASIC16.1■□□□□ 0.17
Vti1aO89116 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vti1aO89116 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.1■□□□□ 0.17
Vti1aO89116 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Vti1aO89116 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vti1aO89116 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Vti1aO89116 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.09■□□□□ 0.17
Vti1aO89116 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.09■□□□□ 0.17
Vti1aO89116 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Vti1aO89116 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.09■□□□□ 0.17
Vti1aO89116 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.09■□□□□ 0.17
Vti1aO89116 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Vti1aO89116 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.09■□□□□ 0.17
Vti1aO89116 Gm10154-201ENSMUST00000084445 354 ntBASIC16.09■□□□□ 0.17
Vti1aO89116 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vti1aO89116 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Vti1aO89116 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vti1aO89116 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Vti1aO89116 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
Vti1aO89116 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vti1aO89116 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Vti1aO89116 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms