Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cops6O88545 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.18■□□□□ 0.5
Cops6O88545 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.18■□□□□ 0.5
Cops6O88545 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cops6O88545 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops6O88545 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cops6O88545 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cops6O88545 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.17■□□□□ 0.5
Cops6O88545 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cops6O88545 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cops6O88545 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cops6O88545 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
Cops6O88545 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cops6O88545 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.17■□□□□ 0.5
Cops6O88545 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.17■□□□□ 0.5
Cops6O88545 Gm45098-201ENSMUST00000207179 657 ntBASIC18.17■□□□□ 0.5
Cops6O88545 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cops6O88545 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cops6O88545 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cops6O88545 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cops6O88545 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cops6O88545 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cops6O88545 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cops6O88545 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cops6O88545 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.16■□□□□ 0.5
Cops6O88545 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cops6O88545 Gm9719-201ENSMUST00000162765 543 ntBASIC18.16■□□□□ 0.5
Cops6O88545 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Gm27680-201ENSMUST00000184192 160 ntBASIC18.16■□□□□ 0.5
Cops6O88545 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cops6O88545 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cops6O88545 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cops6O88545 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cops6O88545 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops6O88545 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Cops6O88545 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Cops6O88545 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.15■□□□□ 0.5
Cops6O88545 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cops6O88545 Gm5866-201ENSMUST00000177881 973 ntBASIC18.15■□□□□ 0.5
Cops6O88545 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.15■□□□□ 0.5
Cops6O88545 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.15■□□□□ 0.5
Cops6O88545 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cops6O88545 Gm2451-201ENSMUST00000199447 999 ntBASIC18.15■□□□□ 0.5
Cops6O88545 Gm44344-201ENSMUST00000200287 129 ntBASIC18.15■□□□□ 0.5
Cops6O88545 Gm10290-201ENSMUST00000200451 999 ntBASIC18.15■□□□□ 0.5
Cops6O88545 Gm7775-201ENSMUST00000218871 853 ntBASIC18.15■□□□□ 0.5
Cops6O88545 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cops6O88545 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.15■□□□□ 0.5
Cops6O88545 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.15■□□□□ 0.5
Cops6O88545 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cops6O88545 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Cops6O88545 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cops6O88545 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cops6O88545 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cops6O88545 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cops6O88545 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cops6O88545 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Gm24543-201ENSMUST00000103867 82 ntBASIC18.14■□□□□ 0.49
Cops6O88545 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.14■□□□□ 0.49
Cops6O88545 Gm8749-201ENSMUST00000117737 331 ntBASIC18.14■□□□□ 0.49
Cops6O88545 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms