Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Gm14494-201ENSMUST00000118786 435 ntBASIC14.45□□□□□ -0.1
Dnmt3bO88509 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Gm7506-201ENSMUST00000207758 815 ntBASIC14.45□□□□□ -0.1
Dnmt3bO88509 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.45□□□□□ -0.1
Dnmt3bO88509 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.45□□□□□ -0.1
Dnmt3bO88509 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3bO88509 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.44□□□□□ -0.1
Dnmt3bO88509 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.44□□□□□ -0.1
Dnmt3bO88509 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Dnmt3bO88509 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Gm14822-201ENSMUST00000122247 291 ntBASIC14.43□□□□□ -0.1
Dnmt3bO88509 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.43□□□□□ -0.1
Dnmt3bO88509 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 AV026068-213ENSMUST00000223675 1171 ntBASIC14.43□□□□□ -0.1
Dnmt3bO88509 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.43□□□□□ -0.1
Dnmt3bO88509 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dnmt3bO88509 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms