Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.17□□□□□ -0.14
Rdh5O55240 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.17□□□□□ -0.14
Rdh5O55240 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.17□□□□□ -0.14
Rdh5O55240 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.17□□□□□ -0.14
Rdh5O55240 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Rdh5O55240 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Rdh5O55240 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.17□□□□□ -0.14
Rdh5O55240 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.16□□□□□ -0.14
Rdh5O55240 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.16□□□□□ -0.14
Rdh5O55240 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.16□□□□□ -0.14
Rdh5O55240 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rdh5O55240 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.16□□□□□ -0.14
Rdh5O55240 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Rdh5O55240 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rdh5O55240 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.16□□□□□ -0.14
Rdh5O55240 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.16□□□□□ -0.14
Rdh5O55240 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Rdh5O55240 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rdh5O55240 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rdh5O55240 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh5O55240 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rdh5O55240 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Rdh5O55240 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.15□□□□□ -0.14
Rdh5O55240 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rdh5O55240 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Rdh5O55240 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.15□□□□□ -0.14
Rdh5O55240 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.15□□□□□ -0.14
Rdh5O55240 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.15□□□□□ -0.14
Rdh5O55240 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rdh5O55240 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rdh5O55240 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.15□□□□□ -0.14
Rdh5O55240 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.15□□□□□ -0.14
Rdh5O55240 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh5O55240 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms