Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cx3cl1O35188 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.07□□□□□ -0.16
Cx3cl1O35188 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Gm14494-201ENSMUST00000118786 435 ntBASIC14.06□□□□□ -0.16
Cx3cl1O35188 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.06□□□□□ -0.16
Cx3cl1O35188 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.06□□□□□ -0.16
Cx3cl1O35188 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.06□□□□□ -0.16
Cx3cl1O35188 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.06□□□□□ -0.16
Cx3cl1O35188 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cl1O35188 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.05□□□□□ -0.16
Cx3cl1O35188 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.05□□□□□ -0.16
Cx3cl1O35188 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 BC037039-201ENSMUST00000192003 2205 ntBASIC14.05□□□□□ -0.16
Cx3cl1O35188 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cl1O35188 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Gm12008-201ENSMUST00000117791 755 ntBASIC14.04□□□□□ -0.16
Cx3cl1O35188 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Mir3113-201ENSMUST00000175478 76 ntBASIC14.04□□□□□ -0.16
Cx3cl1O35188 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.04□□□□□ -0.16
Cx3cl1O35188 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cx3cl1O35188 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.04□□□□□ -0.16
Cx3cl1O35188 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms