Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Hdac1O09106 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Hdac1O09106 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Hdac1O09106 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.8■□□□□ 0.44
Hdac1O09106 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.79■□□□□ 0.44
Hdac1O09106 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Hdac1O09106 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hdac1O09106 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hdac1O09106 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Hdac1O09106 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.79■□□□□ 0.44
Hdac1O09106 Gm13836-201ENSMUST00000121159 501 ntBASIC17.79■□□□□ 0.44
Hdac1O09106 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.79■□□□□ 0.44
Hdac1O09106 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.79■□□□□ 0.44
Hdac1O09106 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.79■□□□□ 0.44
Hdac1O09106 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hdac1O09106 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.79■□□□□ 0.44
Hdac1O09106 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac1O09106 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hdac1O09106 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Hdac1O09106 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.78■□□□□ 0.44
Hdac1O09106 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Gm5682-201ENSMUST00000173402 505 ntBASIC17.78■□□□□ 0.44
Hdac1O09106 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.78■□□□□ 0.44
Hdac1O09106 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Hdac1O09106 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.78■□□□□ 0.44
Hdac1O09106 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Hdac1O09106 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac1O09106 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Hdac1O09106 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac1O09106 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hdac1O09106 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.77■□□□□ 0.44
Hdac1O09106 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac1O09106 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac1O09106 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac1O09106 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.77■□□□□ 0.44
Hdac1O09106 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.77■□□□□ 0.44
Hdac1O09106 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Hdac1O09106 Gm9682-201ENSMUST00000197505 556 ntBASIC17.77■□□□□ 0.44
Hdac1O09106 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac1O09106 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac1O09106 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac1O09106 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac1O09106 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac1O09106 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac1O09106 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac1O09106 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac1O09106 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac1O09106 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac1O09106 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac1O09106 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac1O09106 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hdac1O09106 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac1O09106 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac1O09106 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac1O09106 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac1O09106 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac1O09106 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac1O09106 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.76■□□□□ 0.43
Hdac1O09106 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac1O09106 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Hdac1O09106 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms