Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Carlr-201ENSMUST00000181515 2574 ntBASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Gm7787-201ENSMUST00000216858 688 ntBASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf11bO08712 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Gm11764-201ENSMUST00000120221 623 ntBASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Gm15173-201ENSMUST00000122049 433 ntBASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Gm7230-201ENSMUST00000173026 815 ntBASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf11bO08712 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf11bO08712 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms