Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AlyrefO08583 Gm43179-201ENSMUST00000198797 275 ntBASIC15.13■□□□□ 0.01
AlyrefO08583 Gm44344-201ENSMUST00000200287 129 ntBASIC15.13■□□□□ 0.01
AlyrefO08583 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.13■□□□□ 0.01
AlyrefO08583 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.13■□□□□ 0.01
AlyrefO08583 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AlyrefO08583 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AlyrefO08583 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.13■□□□□ 0.01
AlyrefO08583 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.13■□□□□ 0.01
AlyrefO08583 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.13■□□□□ 0.01
AlyrefO08583 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AlyrefO08583 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AlyrefO08583 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AlyrefO08583 Gm10478-201ENSMUST00000084451 396 ntBASIC15.13■□□□□ 0.01
AlyrefO08583 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AlyrefO08583 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AlyrefO08583 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AlyrefO08583 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
AlyrefO08583 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AlyrefO08583 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.13■□□□□ 0.01
AlyrefO08583 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AlyrefO08583 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
AlyrefO08583 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.12■□□□□ 0.01
AlyrefO08583 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.12■□□□□ 0.01
AlyrefO08583 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.12■□□□□ 0.01
AlyrefO08583 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Gm29667-201ENSMUST00000190817 490 ntBASIC15.12■□□□□ 0.01
AlyrefO08583 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
AlyrefO08583 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
AlyrefO08583 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.12■□□□□ 0.01
AlyrefO08583 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
AlyrefO08583 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
AlyrefO08583 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AlyrefO08583 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
AlyrefO08583 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
AlyrefO08583 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
AlyrefO08583 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.11■□□□□ 0.01
AlyrefO08583 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.11■□□□□ 0.01
AlyrefO08583 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.11■□□□□ 0.01
AlyrefO08583 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.11■□□□□ 0.01
AlyrefO08583 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.11■□□□□ 0.01
AlyrefO08583 Gm18753-201ENSMUST00000201000 566 ntBASIC15.11■□□□□ 0.01
AlyrefO08583 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.11■□□□□ 0.01
AlyrefO08583 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.11■□□□□ 0.01
AlyrefO08583 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
AlyrefO08583 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
AlyrefO08583 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.11■□□□□ 0.01
AlyrefO08583 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AlyrefO08583 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AlyrefO08583 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AlyrefO08583 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AlyrefO08583 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AlyrefO08583 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AlyrefO08583 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AlyrefO08583 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.1■□□□□ 0.01
AlyrefO08583 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AlyrefO08583 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AlyrefO08583 Gm12008-201ENSMUST00000117791 755 ntBASIC15.1■□□□□ 0.01
AlyrefO08583 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.1■□□□□ 0.01
AlyrefO08583 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.1■□□□□ 0.01
AlyrefO08583 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AlyrefO08583 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AlyrefO08583 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AlyrefO08583 Gm17420-201ENSMUST00000164753 153 ntBASIC15.1■□□□□ 0.01
AlyrefO08583 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.1■□□□□ 0.01
AlyrefO08583 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AlyrefO08583 Gm27680-201ENSMUST00000184192 160 ntBASIC15.1■□□□□ 0.01
AlyrefO08583 Gm28630-201ENSMUST00000187806 498 ntBASIC15.1■□□□□ 0.01
AlyrefO08583 Gm38225-201ENSMUST00000194001 393 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms