Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm20708H3BKF4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm20708H3BKF4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm20708H3BKF4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm20708H3BKF4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm20708H3BKF4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm20708H3BKF4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm20708H3BKF4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm20708H3BKF4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Gm25911-201ENSMUST00000157621 56 ntBASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm20708H3BKF4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Rpph1-201ENSMUST00000175096 319 ntBASIC12.5□□□□□ -0.41
Gm20708H3BKF4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Gm8000-201ENSMUST00000188378 592 ntBASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.5□□□□□ -0.41
Gm20708H3BKF4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm20708H3BKF4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm20708H3BKF4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm20708H3BKF4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm20708H3BKF4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm20708H3BKF4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm20708H3BKF4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm20708H3BKF4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm20708H3BKF4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gm20708H3BKF4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm20708H3BKF4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm20708H3BKF4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Gm20708H3BKF4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gm20708H3BKF4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms