Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ube4aE9Q735 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.88■□□□□ 0.45
Ube4aE9Q735 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Gm15487-201ENSMUST00000122373 465 ntBASIC17.88■□□□□ 0.45
Ube4aE9Q735 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.88■□□□□ 0.45
Ube4aE9Q735 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4aE9Q735 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Gm14719-201ENSMUST00000121891 340 ntBASIC17.87■□□□□ 0.45
Ube4aE9Q735 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.87■□□□□ 0.45
Ube4aE9Q735 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Olfr286-202ENSMUST00000205305 969 ntBASIC17.87■□□□□ 0.45
Ube4aE9Q735 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Gm2423-201ENSMUST00000074863 733 ntBASIC17.87■□□□□ 0.45
Ube4aE9Q735 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ube4aE9Q735 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4aE9Q735 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.86■□□□□ 0.45
Ube4aE9Q735 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4aE9Q735 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.86■□□□□ 0.45
Ube4aE9Q735 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Gm27838-201ENSMUST00000184829 128 ntBASIC17.85■□□□□ 0.45
Ube4aE9Q735 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms