Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.14■□□□□ 0.33
Syce3B5KM66 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.14■□□□□ 0.33
Syce3B5KM66 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Syce3B5KM66 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.13■□□□□ 0.33
Syce3B5KM66 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Syce3B5KM66 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.13■□□□□ 0.33
Syce3B5KM66 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.13■□□□□ 0.33
Syce3B5KM66 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.13■□□□□ 0.33
Syce3B5KM66 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.13■□□□□ 0.33
Syce3B5KM66 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Gm13312-201ENSMUST00000119631 718 ntBASIC17.13■□□□□ 0.33
Syce3B5KM66 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.13■□□□□ 0.33
Syce3B5KM66 Gm18032-201ENSMUST00000222541 538 ntBASIC17.13■□□□□ 0.33
Syce3B5KM66 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.13■□□□□ 0.33
Syce3B5KM66 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Syce3B5KM66 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.13■□□□□ 0.33
Syce3B5KM66 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syce3B5KM66 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Syce3B5KM66 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Syce3B5KM66 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.12■□□□□ 0.33
Syce3B5KM66 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.12■□□□□ 0.33
Syce3B5KM66 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.12■□□□□ 0.33
Syce3B5KM66 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.12■□□□□ 0.33
Syce3B5KM66 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.12■□□□□ 0.33
Syce3B5KM66 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Syce3B5KM66 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Syce3B5KM66 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.12■□□□□ 0.33
Syce3B5KM66 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syce3B5KM66 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Matn2-206ENSMUST00000228570 2798 ntBASIC17.11■□□□□ 0.33
Syce3B5KM66 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Syce3B5KM66 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.11■□□□□ 0.33
Syce3B5KM66 Gm6345-202ENSMUST00000180900 204 ntBASIC17.11■□□□□ 0.33
Syce3B5KM66 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Gm9172-201ENSMUST00000212092 954 ntBASIC17.11■□□□□ 0.33
Syce3B5KM66 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.11■□□□□ 0.33
Syce3B5KM66 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.11■□□□□ 0.33
Syce3B5KM66 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.11■□□□□ 0.33
Syce3B5KM66 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syce3B5KM66 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syce3B5KM66 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.1■□□□□ 0.33
Syce3B5KM66 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms