Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Phf11cB4XVP9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.21□□□□□ -0.14
Phf11cB4XVP9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Phf11cB4XVP9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Phf11cB4XVP9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Phf11cB4XVP9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Phf11cB4XVP9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Gm15358-201ENSMUST00000119249 520 ntBASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Gm12644-201ENSMUST00000119935 606 ntBASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Gm12134-201ENSMUST00000122109 520 ntBASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.19□□□□□ -0.14
Phf11cB4XVP9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Gm15372-201ENSMUST00000120729 834 ntBASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.18□□□□□ -0.14
Phf11cB4XVP9 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms