Protein–RNA interactions for Protein: A8DUK4

Hbb-bs, Beta-globin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-bsA8DUK4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-bsA8DUK4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Gm29707-201ENSMUST00000196325 491 ntBASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-bsA8DUK4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Dio3-201ENSMUST00000097228 1449 ntBASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-bsA8DUK4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms