Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Prob1-201ENSMUST00000097619 3021 ntBASIC12.6□□□□□ -0.39
Col6a4A2AX52 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Gm22189-201ENSMUST00000103822 86 ntBASIC12.6□□□□□ -0.39
Col6a4A2AX52 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Col6a4A2AX52 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.6□□□□□ -0.39
Col6a4A2AX52 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Gm27838-201ENSMUST00000184829 128 ntBASIC12.6□□□□□ -0.39
Col6a4A2AX52 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.6□□□□□ -0.39
Col6a4A2AX52 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a4A2AX52 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.59□□□□□ -0.39
Col6a4A2AX52 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.59□□□□□ -0.39
Col6a4A2AX52 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 App-207ENSMUST00000227737 2827 ntBASIC12.59□□□□□ -0.39
Col6a4A2AX52 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.59□□□□□ -0.39
Col6a4A2AX52 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.59□□□□□ -0.39
Col6a4A2AX52 Gm15321-201ENSMUST00000121290 288 ntBASIC12.59□□□□□ -0.39
Col6a4A2AX52 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Gm6007-201ENSMUST00000208170 823 ntBASIC12.59□□□□□ -0.39
Col6a4A2AX52 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Mir6420-201ENSMUST00000185032 102 ntBASIC12.59□□□□□ -0.39
Col6a4A2AX52 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a4A2AX52 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col6a4A2AX52 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col6a4A2AX52 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col6a4A2AX52 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms