Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm10499-201ENSMUST00000174094 934 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44357-201ENSMUST00000195897 142 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm19658-201ENSMUST00000196231 138 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44367-201ENSMUST00000196836 138 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44350-201ENSMUST00000197197 138 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44390-201ENSMUST00000197533 144 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44313-201ENSMUST00000198018 138 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44486-201ENSMUST00000198508 138 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44314-201ENSMUST00000199263 138 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44394-201ENSMUST00000199558 138 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44484-201ENSMUST00000199873 138 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44466-201ENSMUST00000200264 138 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44359-201ENSMUST00000200671 138 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav21-dv12A0A075B6C4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav21-dv12A0A075B6C4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms