Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Trav6-5A0A075B6B5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav6-5A0A075B6B5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav6-5A0A075B6B5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-5A0A075B6B5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Gm27389-201ENSMUST00000183622 195 ntBASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-5A0A075B6B5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms