Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm18669-201ENSMUST00000216049 778 ntBASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav6n-6A0A075B6B2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms