Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.99□□□□□ -0.01
H2afb2S4R1M3 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb2S4R1M3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.98□□□□□ -0.01
H2afb2S4R1M3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb2S4R1M3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.97□□□□□ -0.01
H2afb2S4R1M3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Gm12350-201ENSMUST00000121208 462 ntBASIC14.97□□□□□ -0.01
H2afb2S4R1M3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.97□□□□□ -0.01
H2afb2S4R1M3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb2S4R1M3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Gm2651-201ENSMUST00000203560 838 ntBASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms