Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Smarcb1Q9Z0H3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Gm5779-201ENSMUST00000218467 910 ntBASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smarcb1Q9Z0H3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smarcb1Q9Z0H3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms