Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Gm14140-201ENSMUST00000119999 995 ntBASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Gm12260-201ENSMUST00000122447 411 ntBASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubb3Q9ERD7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Gm11779-201ENSMUST00000118541 368 ntBASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Gm11594-201ENSMUST00000122313 162 ntBASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Gm23547-201ENSMUST00000158210 271 ntBASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Tubb3Q9ERD7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Gm15467-201ENSMUST00000120582 445 ntBASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Gm5264-201ENSMUST00000190584 848 ntBASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Gm2213-201ENSMUST00000197485 688 ntBASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tubb3Q9ERD7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Carlr-201ENSMUST00000181515 2574 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms