Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Gm18489-201ENSMUST00000172565 551 ntBASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Gm5364-201ENSMUST00000216789 889 ntBASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Gm27628-201ENSMUST00000184911 107 ntBASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Carlr-201ENSMUST00000181515 2574 ntBASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a3bpQ9EQG9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col4a3bpQ9EQG9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col4a3bpQ9EQG9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col4a3bpQ9EQG9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Gm5682-201ENSMUST00000173402 505 ntBASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Gm43767-201ENSMUST00000198933 381 ntBASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Psmb5-202ENSMUST00000227257 622 ntBASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a3bpQ9EQG9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.13■□□□□ 0.33
Col4a3bpQ9EQG9 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms