Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Gm26039-201ENSMUST00000158152 144 ntBASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Gm18959-201ENSMUST00000208954 655 ntBASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmgn3Q9DCB1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.06□□□□□ -0.16
Hmgn3Q9DCB1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn3Q9DCB1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms