Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Gm13223-201ENSMUST00000118609 747 ntBASIC17.8■□□□□ 0.44
Stag1Q9D3E6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.8■□□□□ 0.44
Stag1Q9D3E6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stag1Q9D3E6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Gm13015-201ENSMUST00000118674 204 ntBASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Gm29541-201ENSMUST00000191351 678 ntBASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Gm18049-201ENSMUST00000208909 581 ntBASIC17.79■□□□□ 0.44
Stag1Q9D3E6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.79■□□□□ 0.44
Stag1Q9D3E6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Stag1Q9D3E6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms