Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.63■□□□□ 0.41
Smc3Q9CW03 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.63■□□□□ 0.41
Smc3Q9CW03 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.62■□□□□ 0.41
Smc3Q9CW03 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.62■□□□□ 0.41
Smc3Q9CW03 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc3Q9CW03 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.61■□□□□ 0.41
Smc3Q9CW03 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.61■□□□□ 0.41
Smc3Q9CW03 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc3Q9CW03 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.6■□□□□ 0.41
Smc3Q9CW03 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.6■□□□□ 0.41
Smc3Q9CW03 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Gm13418-201ENSMUST00000119097 944 ntBASIC17.6■□□□□ 0.41
Smc3Q9CW03 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.6■□□□□ 0.41
Smc3Q9CW03 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.6■□□□□ 0.41
Smc3Q9CW03 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.6■□□□□ 0.41
Smc3Q9CW03 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.6■□□□□ 0.41
Smc3Q9CW03 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms