Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.67□□□□□ -0.06
Trim16Q99PP9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Gm10060-201ENSMUST00000212002 111 ntBASIC14.67□□□□□ -0.06
Trim16Q99PP9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.67□□□□□ -0.06
Trim16Q99PP9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.66□□□□□ -0.06
Trim16Q99PP9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim16Q99PP9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trim16Q99PP9 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.66□□□□□ -0.06
Trim16Q99PP9 Mzt1-203ENSMUST00000227948 952 ntBASIC14.66□□□□□ -0.06
Trim16Q99PP9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.66□□□□□ -0.06
Trim16Q99PP9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim16Q99PP9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.65□□□□□ -0.06
Trim16Q99PP9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.65□□□□□ -0.06
Trim16Q99PP9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim16Q99PP9 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.64□□□□□ -0.07
Trim16Q99PP9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms