Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Gm27680-201ENSMUST00000184192 160 ntBASIC18.4■□□□□ 0.54
Trim34aQ99PP6 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34aQ99PP6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim34aQ99PP6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim34aQ99PP6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim34aQ99PP6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim34aQ99PP6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim34aQ99PP6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Gm5566-201ENSMUST00000116118 459 ntBASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Gm9719-201ENSMUST00000162765 543 ntBASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Gm7730-201ENSMUST00000212486 454 ntBASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim34aQ99PP6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Gm24543-201ENSMUST00000103867 82 ntBASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms