Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm18056-201ENSMUST00000207670 568 ntBASIC15.05■□□□□ 0
Cdh23Q99PF4 Gm18061-201ENSMUST00000208350 562 ntBASIC15.05■□□□□ 0
Cdh23Q99PF4 Gm18063-201ENSMUST00000208529 568 ntBASIC15.05■□□□□ 0
Cdh23Q99PF4 Gm18052-201ENSMUST00000208750 559 ntBASIC15.05■□□□□ 0
Cdh23Q99PF4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.05■□□□□ 0
Cdh23Q99PF4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdh23Q99PF4 Gm7399-201ENSMUST00000032395 858 ntBASIC15.05■□□□□ 0
Cdh23Q99PF4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdh23Q99PF4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdh23Q99PF4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdh23Q99PF4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cdh23Q99PF4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdh23Q99PF4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdh23Q99PF4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh23Q99PF4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdh23Q99PF4 Gm29127-201ENSMUST00000188304 517 ntBASIC15.05■□□□□ -0
Cdh23Q99PF4 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.05■□□□□ -0
Cdh23Q99PF4 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Cdh23Q99PF4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh23Q99PF4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh23Q99PF4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh23Q99PF4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh23Q99PF4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdh23Q99PF4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh23Q99PF4 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.05■□□□□ -0
Cdh23Q99PF4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdh23Q99PF4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdh23Q99PF4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh23Q99PF4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cdh23Q99PF4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cdh23Q99PF4 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.04■□□□□ -0
Cdh23Q99PF4 Mir7070-201ENSMUST00000183657 86 ntBASIC15.04■□□□□ -0
Cdh23Q99PF4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cdh23Q99PF4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Gm5187-201ENSMUST00000117317 991 ntBASIC15.04■□□□□ -0
Cdh23Q99PF4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.04■□□□□ -0
Cdh23Q99PF4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdh23Q99PF4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh23Q99PF4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Cdh23Q99PF4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.03■□□□□ -0
Cdh23Q99PF4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Gm5354-201ENSMUST00000182417 973 ntBASIC15.03■□□□□ -0
Cdh23Q99PF4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.03■□□□□ -0
Cdh23Q99PF4 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.03■□□□□ -0
Cdh23Q99PF4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdh23Q99PF4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cdh23Q99PF4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Cdh23Q99PF4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.02■□□□□ -0
Cdh23Q99PF4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh23Q99PF4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.02■□□□□ -0
Cdh23Q99PF4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdh23Q99PF4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh23Q99PF4 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.02■□□□□ -0
Cdh23Q99PF4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cdh23Q99PF4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.02■□□□□ -0
Cdh23Q99PF4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh23Q99PF4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh23Q99PF4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.02■□□□□ -0
Cdh23Q99PF4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdh23Q99PF4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.02■□□□□ -0
Cdh23Q99PF4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh23Q99PF4 Gm16570-201ENSMUST00000161951 436 ntBASIC15.02■□□□□ -0
Cdh23Q99PF4 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.02■□□□□ -0
Cdh23Q99PF4 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.02■□□□□ -0
Cdh23Q99PF4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh23Q99PF4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh23Q99PF4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh23Q99PF4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh23Q99PF4 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms