Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smtnl1Q99LM3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.42■□□□□ 0.22
Smtnl1Q99LM3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smtnl1Q99LM3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.42■□□□□ 0.22
Smtnl1Q99LM3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smtnl1Q99LM3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smtnl1Q99LM3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smtnl1Q99LM3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smtnl1Q99LM3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smtnl1Q99LM3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smtnl1Q99LM3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.42■□□□□ 0.22
Smtnl1Q99LM3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.42■□□□□ 0.22
Smtnl1Q99LM3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Gm7977-201ENSMUST00000193787 748 ntBASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smtnl1Q99LM3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Gm25990-201ENSMUST00000102440 86 ntBASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Gm7222-201ENSMUST00000117512 906 ntBASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Gm9682-201ENSMUST00000197505 556 ntBASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Gm43347-201ENSMUST00000200226 580 ntBASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Gm7787-201ENSMUST00000216858 688 ntBASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smtnl1Q99LM3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Smtnl1Q99LM3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Smtnl1Q99LM3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm28033-201ENSMUST00000184224 96 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm44357-201ENSMUST00000195897 142 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm19658-201ENSMUST00000196231 138 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm44367-201ENSMUST00000196836 138 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm44350-201ENSMUST00000197197 138 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm44390-201ENSMUST00000197533 144 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm44313-201ENSMUST00000198018 138 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm44486-201ENSMUST00000198508 138 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm44314-201ENSMUST00000199263 138 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm44394-201ENSMUST00000199558 138 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm44484-201ENSMUST00000199873 138 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm44466-201ENSMUST00000200264 138 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gm44359-201ENSMUST00000200671 138 ntBASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smtnl1Q99LM3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms