Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cstf1Q99LC2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cstf1Q99LC2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cstf1Q99LC2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
Cstf1Q99LC2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cstf1Q99LC2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cstf1Q99LC2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cstf1Q99LC2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cstf1Q99LC2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Cstf1Q99LC2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cstf1Q99LC2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Gm16026-204ENSMUST00000162652 683 ntBASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.95□□□□□ -0.02
Cstf1Q99LC2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Gm27838-201ENSMUST00000184829 128 ntBASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Gm28630-201ENSMUST00000187806 498 ntBASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Gm29541-201ENSMUST00000191351 678 ntBASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.94□□□□□ -0.02
Cstf1Q99LC2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms