Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Syt7-205ENSMUST00000224135 1557 ntBASIC17.21■□□□□ 0.35
Rfc4Q99J62 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.21■□□□□ 0.35
Rfc4Q99J62 Gm14719-201ENSMUST00000121891 340 ntBASIC17.21■□□□□ 0.35
Rfc4Q99J62 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rfc4Q99J62 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Rfc4Q99J62 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.21■□□□□ 0.35
Rfc4Q99J62 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Rfc4Q99J62 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rfc4Q99J62 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rfc4Q99J62 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfc4Q99J62 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Gm15487-201ENSMUST00000122373 465 ntBASIC17.2■□□□□ 0.34
Rfc4Q99J62 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.2■□□□□ 0.34
Rfc4Q99J62 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.2■□□□□ 0.34
Rfc4Q99J62 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfc4Q99J62 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.19■□□□□ 0.34
Rfc4Q99J62 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Gm27680-201ENSMUST00000184192 160 ntBASIC17.19■□□□□ 0.34
Rfc4Q99J62 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Gm43767-201ENSMUST00000198933 381 ntBASIC17.19■□□□□ 0.34
Rfc4Q99J62 Gm44344-201ENSMUST00000200287 129 ntBASIC17.19■□□□□ 0.34
Rfc4Q99J62 Gm44855-201ENSMUST00000205725 362 ntBASIC17.19■□□□□ 0.34
Rfc4Q99J62 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.19■□□□□ 0.34
Rfc4Q99J62 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Syt7-204ENSMUST00000223586 1344 ntBASIC17.19■□□□□ 0.34
Rfc4Q99J62 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfc4Q99J62 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfc4Q99J62 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.18■□□□□ 0.34
Rfc4Q99J62 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfc4Q99J62 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfc4Q99J62 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.18■□□□□ 0.34
Rfc4Q99J62 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfc4Q99J62 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.18■□□□□ 0.34
Rfc4Q99J62 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.18■□□□□ 0.34
Rfc4Q99J62 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfc4Q99J62 Gm27533-201ENSMUST00000183800 152 ntBASIC17.18■□□□□ 0.34
Rfc4Q99J62 Gm27838-201ENSMUST00000184829 128 ntBASIC17.18■□□□□ 0.34
Rfc4Q99J62 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.18■□□□□ 0.34
Rfc4Q99J62 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfc4Q99J62 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfc4Q99J62 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfc4Q99J62 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rfc4Q99J62 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.18■□□□□ 0.34
Rfc4Q99J62 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Gm7775-201ENSMUST00000218871 853 ntBASIC17.17■□□□□ 0.34
Rfc4Q99J62 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.17■□□□□ 0.34
Rfc4Q99J62 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.17■□□□□ 0.34
Rfc4Q99J62 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms