Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga11Q91XY8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Gm18733-201ENSMUST00000173950 856 ntBASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Gm6376-201ENSMUST00000209407 580 ntBASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga11Q91XY8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Gm18489-201ENSMUST00000172565 551 ntBASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga11Q91XY8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Celf4-206ENSMUST00000224553 1729 ntBASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms