Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.78□□□□□ -0.04
Pcdhga4Q91XY4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga4Q91XY4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Gm2213-201ENSMUST00000197485 688 ntBASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Gm45167-201ENSMUST00000208007 322 ntBASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga4Q91XY4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Gm12260-201ENSMUST00000122447 411 ntBASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Gm27525-201ENSMUST00000184465 107 ntBASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Mir8117-201ENSMUST00000184773 107 ntBASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms