Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Gm4899-201ENSMUST00000178708 719 ntBASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Gm43767-201ENSMUST00000198933 381 ntBASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Gm2651-201ENSMUST00000203560 838 ntBASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Gm44771-201ENSMUST00000206975 626 ntBASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Gm18246-201ENSMUST00000221023 728 ntBASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Mzt1-203ENSMUST00000227948 952 ntBASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim29Q8R2Q0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim29Q8R2Q0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim29Q8R2Q0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms