Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Mir3081-201ENSMUST00000175305 84 ntBASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 AC158538.2-201ENSMUST00000225455 906 ntBASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd3Q8R1N4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Carlr-201ENSMUST00000181515 2574 ntBASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Gm25016-201ENSMUST00000158399 131 ntBASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Mir6982-201ENSMUST00000184354 68 ntBASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Gm29518-201ENSMUST00000190858 372 ntBASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.98□□□□□ -0.01
Nudcd3Q8R1N4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Gm23547-201ENSMUST00000158210 271 ntBASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Gm25745-201ENSMUST00000174945 133 ntBASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nudcd3Q8R1N4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms