Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sf3a1Q8K4Z5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Sf3a1Q8K4Z5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.33■□□□□ 0.53
Sf3a1Q8K4Z5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Gm2272-201ENSMUST00000194903 582 ntBASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sf3a1Q8K4Z5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Gm45747-201ENSMUST00000212203 999 ntBASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Thap2-203ENSMUST00000218989 527 ntBASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sf3a1Q8K4Z5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Gm10175-201ENSMUST00000086013 645 ntBASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sf3a1Q8K4Z5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Gm16198-201ENSMUST00000118766 670 ntBASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Gm44492-201ENSMUST00000197012 141 ntBASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sf3a1Q8K4Z5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms