Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm28Q8CGC6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Gm5312-201ENSMUST00000203728 547 ntBASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rbm28Q8CGC6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Mir6990-201ENSMUST00000183724 91 ntBASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbm28Q8CGC6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Gm18889-201ENSMUST00000174284 929 ntBASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Gm44872-201ENSMUST00000207864 420 ntBASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Gm10154-201ENSMUST00000084445 354 ntBASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.67■□□□□ 0.42
Rbm28Q8CGC6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms