Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.37□□□□□ -0.27
ShfQ8CG80 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ShfQ8CG80 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
ShfQ8CG80 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ShfQ8CG80 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.37□□□□□ -0.27
ShfQ8CG80 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.37□□□□□ -0.27
ShfQ8CG80 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.36□□□□□ -0.27
ShfQ8CG80 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.36□□□□□ -0.27
ShfQ8CG80 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.36□□□□□ -0.27
ShfQ8CG80 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ShfQ8CG80 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ShfQ8CG80 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.36□□□□□ -0.27
ShfQ8CG80 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
ShfQ8CG80 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.36□□□□□ -0.27
ShfQ8CG80 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.36□□□□□ -0.27
ShfQ8CG80 Gm37153-201ENSMUST00000193637 231 ntBASIC13.36□□□□□ -0.27
ShfQ8CG80 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.36□□□□□ -0.27
ShfQ8CG80 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ShfQ8CG80 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShfQ8CG80 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.35□□□□□ -0.27
ShfQ8CG80 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.35□□□□□ -0.27
ShfQ8CG80 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.35□□□□□ -0.27
ShfQ8CG80 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ShfQ8CG80 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.35□□□□□ -0.27
ShfQ8CG80 Gm9682-201ENSMUST00000197505 556 ntBASIC13.35□□□□□ -0.27
ShfQ8CG80 Gm18669-201ENSMUST00000216049 778 ntBASIC13.35□□□□□ -0.27
ShfQ8CG80 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ShfQ8CG80 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ShfQ8CG80 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ShfQ8CG80 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.35□□□□□ -0.27
ShfQ8CG80 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ShfQ8CG80 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ShfQ8CG80 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms