Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Gm25911-201ENSMUST00000157621 56 ntBASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Gm13464-201ENSMUST00000119418 935 ntBASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp44Q8C2S0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp44Q8C2S0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp44Q8C2S0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms